Facilities & Other Resources on Grant Applications

The UCSD IGM Genomics Center offers full services in high throughput sequencing as well as whole-genome genotyping and copy number variation analysis. The IGM Genomics Center offers assay design consultation, sequencing library preparation (DNA/RNA/smallRNA/targeted sequencing), single cell RNA, ATAC and Multiome sequencing (10X Genomics), spatial transcriptomics (Nanostring and 10X Genomics), lllumina platform sequencing (MiSeq and NovaSeq 6000), and Illumina genotyping and methylation arrays.

The IGM Genomics Center occupies 2000 square feet of laboratory and office space, and is equipped with two Illumina MiSeq benchtop sequencers, an Illumina NovaSeq 6000 sequencing systems, an Illumina iScan system, a Tecan liquid handling system, a 10X Genomics Chromium Controller, a Blue Cat Bio Centrifugal Blue Washer, Agilent 2200 and 4200 TapeStation instruments, a Covaris E220 focused-ultrasonicator, an Eppendorf epMotion liquid handling system, a PippinHT, a Roche Lightcycler 480, a BioRad CFX Connect Real-Time PCR Detection System, a NanoDrop ND-1000, and a Qubit 2.0 Fluorometer.

Letters of support are available upon request.

Please notify us of any grant application in which the IGM Genomics Center is listed as a resource both when they are submitted and when they are funded. Send the PDF and any notifications to kjepsen@ucsd.edu.